Genki Terashi

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Protein structure alignment Flexible alignment Residue-residue network

研究兴趣

论文共 105 篇作者统计合作学者相似作者

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DiffModeler: Large Macromolecular Structure Modeling in Low-Resolution Cryo-EM Maps Using Diffusion Model

Xiao Wang, Han Zhu,Genki Terashi, Manav Taluja,Daisuke Kihara

bioRxiv the preprint server for biology (2024)

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DAQ-score Database: Deep-learning Based Quality Estimation of Cryo-Em Derived Protein Models

Tsukasa Nakamura,Xiao Wang,Genki Terashi,Daisuke Kihara

BIOPHYSICAL JOURNALno. 3 (2024): 133A-133A

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Outcomes of the EMDataResource Cryo-EM Ligand Modeling Challenge

Catherine L. Lawson,Andriy Kryshtafovych,Grigore D. Pintilie,Stephen K. Burley,Jiri Cerny,Vincent B. Chen,Paul Emsley,Alberto Gobbi,Andrzej Joachimiak,Sigrid Noreng,Michael G. Prisant,Randy J. Read,Jane S. Richardson,Alexis L. Rohou,Bohdan Schneider,Benjamin D. Sellers,Chenghua Shao, Elizabeth Sourial,Chris I. Williams,Christopher J. Williams, Ying Yang, Venkat Abbaraju,Pavel V. Afonine,Matthew L. Baker,Paul S. Bond,Tom L. Blundell,Tom Burnley,Arthur Campbell,Renzhi Cao,Jianlin Cheng,Grzegorz Chojnowski,K. D. Cowtan,Frank DiMaio,Reza Esmaeeli,Nabin Giri,Helmut Grubmueller,Soon Wen Hoh,Jie Hou,Corey F. Hryc,Carola Hunte,Maxim Igaev,Agnel P. Joseph,Wei-Chun Kao,Daisuke Kihara,Dilip Kumar,Lijun Lang, Sean Lin,Sai R. Maddhuri Venkata Subramaniya,Sumit Mittal,Arup Mondal,Nigel W. Moriarty,Andrew Muenks,Garib N. Murshudov,Robert A. Nicholls,Mateusz Olek,Colin M. Palmer,Alberto Perez,Emmi Pohjolainen,Karunakar R. Pothula,Christopher N. Rowley,Daipayan Sarkar,Luisa U. Schaefer,Christopher J. Schlicksup,Gunnar F. Schroeder,Mrinal Shekhar,Dong Si,Abhishek Singharoy,Oleg V. Sobolev,Genki Terashi,Andrea C. Vaiana,Sundeep C. Vedithi,Jacob Verburgt,Xiao Wang,Rangana Warshamanage,Martyn D. Winn,Simone Weyand,Keitaro Yamashita,Minglei Zhao,Michael F. Schmid,Helen M. Berman,Wah Chiu

Nature methodsno. 7 (2024): 1340-1348

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Unveiling the Stochastic Nature of Human Heteropolymer Ferritin Self-Assembly Mechanism

Fadi Bou-Abdallah,Jeremie Fish,Genki Terashi, Yuanyuan Zhang,Daisuke Kihara,Paolo Arosio

PROTEIN SCIENCEno. 8 (2024)

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DAQ-Score Database: Assessment of Map-Model Compatibility for Protein Structure Models from Cryo-Em Maps

Tsukasa Nakamura,Xiao Wang,Genki Terashi,Daisuke Kihara

NATURE METHODSno. 6 (2023): 775-776

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Protein Model Refinement for Cryo-Em Maps Using AlphaFold2 and the DAQ Score

Genki Terashi,Xiao Wang,Daisuke Kihara

Acta crystallographica Section D, Structural biology（2023）

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Integrated Protocol of Protein Structure Modeling for Cryo-EM with Deep Learning and Structure Prediction

Genki Terashi,Xiao Wang, Devashish Prasad,Tsukasa Nakamura,Daisuke Kihara

bioRxiv the preprint server for biology (2023)

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CryoREAD: De Novo Structure Modeling for Nucleic Acids in Cryo-Em Maps Using Deep Learning

Xiao Wang,Genki Terashi,Daisuke Kihara

Nature methodsno. 11 (2023): 1739-1747

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Bioinformatic Approaches for Characterizing Molecular Structure and Function of Food Proteins

Harrison Helmick,Anika Jain,Genki Terashi,Andrea Liceaga,Arun K. Bhunia,Daisuke Kihara,Jozef L. Kokini

Annual Review of Food Science and Technology（2023）

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Quality Assessment and Biomolecular Structure Modeling for Cryo-EM Using Deep Learning

Genki Terashi,Xiao Wang,Tsukasa Nakamura, Devashish Krishna Prasad,Daisuke Kihara

ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES (2023): A52-A52

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论文共 105 篇作者统计合作学者相似作者