基本信息
浏览量:190
职业迁徙
个人简介
自我简介
My research focuses on data analysis of cancer genomic data. I am a trained bioinformatician with more than 10 years of experience. Since 2011 I joined MD Anderson and have been extensively involved in The Cancer Genome Atlas project. In addition to contributing to the TCGA Glioblastoma and lower grade glioma analyses, I analyzed genomic instability by examining DNA breakpoints in GBM. I performed a longitudinal analysis of GBM recurrence, in which I extensively investigated the clonal architecture of GBM. Since 2013 I have worked on the TCGA adrenocortical carcinoma (ACC) project as data and analysis coordinator. This project involves a comprehensive analysis of ACC molecular data generated by our consortium. My research comprehends data including DNA/RNA sequencing, copy number and methylation. I programed the RNA sequencing pipeline PRADA (http://bioinformatics.mdanderson.org/main/PRADA:Overview). A highlight of the tool is the high sensitivity and specificity of gene fusion detection.
My long time research interest is to understand genomic instability in cancer initiation and progression, and how to use the information to predict prognosis, clinical response to therapy, etc.
A full list of publications at PubMed
http://www.ncbi.nlm.nih.gov/sites/myncbi/1lQwkc6atlSkr/bibliography/48172182/public/?sort=date&direction=descending
Follow me on Twitter:
https://twitter.com/zhengsiyuan
研究兴趣
论文共 194 篇作者统计合作学者相似作者
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JNCI Journal of the National Cancer Institute (2024)
Yi Xu,Michael H. Nipper, Angel A. Dominguez,Zhenqing Ye,Naoki Akanuma,Kevin Lopez,Janice J. Deng, Destiny Arenas, Ava Sanchez,Francis E. Sharkey,Colin M. Court,Aatur D. Singhi,Huamin Wang,Martin E. Fernandez-Zapico,Lu-Zhe Sun,Siyuan Zheng, Yidong Chen,Jun Liu,Pei Wang
Long Wang,Nicole R. Hensch,Kathryn Bondra,Prethish Sreenivas, Xiang R. Zhao,Jiangfei Chen, Rodrigo Moreno Campos,Kunal Baxi,Angelina V. Vaseva,Benjamin D. Sunkel, Berkley E. Gryder,Silvia Pomella,Benjamin Z. Stanton,Siyuan Zheng,Eleanor Y. Chen, Rossella Rota,Javed Khan,Peter J. Houghton,Myron S. Ignatius
crossref(2023)
crossref(2023)
Lingxiang Wu,Wei Wu,Junxia Zhang,Zheng Zhao,Liangyu Li,Mengyan Zhu,Min Wu,Fan Wu,Fengqi Zhou,Yuxin Du,Rui-Chao Chai,Wei Zhang,Xiaoguang Qiu,Quanzhong Liu,Ziyu Wang,Jie Li,Kening Li,Apeng Chen,Yinan Jiang,Xiangwei Xiao,Han Zou,Rashmi Srivastava,Tingting Zhang,Yun Cai,Yuan Liang,Bin Huang,Ruohan Zhang,Fan Lin,Lang Hu,Xiuxing Wang,Xu Qian,Sali Lv,Baoli Hu,Siyuan Zheng,Zhibin Hu,Hongbing Shen,Yongping You,Roel G.W. Verhaak,Tao Jiang,Qianghu Wang
openalex(2023)
Fenghua He,Abhik Bandyopadhyay,Laura J. Klesse,Anna Rogojina,Erin Butler,Taylor Hartshorne,Trevor Holland,Luz Perez Prado, Anne-Marie Langevan,Allison Grimes,Chatchawin Assanasen,Zhao Lai, Yi Zeng,Dias Kurmashev,Lin Xu,Yang Xie,Yidong Chen,Xiaojing Wang,Gail E. Tomlinson,Stephen X. Skapek,Raushan T. Kurmasheva,Peter J. Houghton,Siyuan Zheng
Cancer Researchno. 7_Supplement (2023): 3572-3572
Liem M. Phan,Enrique Fuentes-Mattei,Weixin Wu,Guermarie Velazquez-Torres,Kanishka Sircar,Christopher G. Wood,Tao Hai,Camilo Jimenez,Gilbert J. Cote,Levent Ozsari,Marie-Claude Hofmann,Siyuan Zheng,Roeland Verhaak,Lance Pagliaro,Maria Angelica Cortez,Mong-Hong Lee,Sai-Ching J. Yeung,Mouhammed Amir Habra
crossref(2023)
Funan He,Abhik M. Bandyopadhyay,Laura J. Klesse,Anna Rogojina,Sang H. Chun,Erin Butler,Taylor Hartshorne,Trevor Holland,Dawn Garcia,Korri Weldon, Luz-Nereida Perez Prado,Anne-Marie Langevin,Allison C. Grimes,Aaron Sugalski,Shafqat Shah,Chatchawin Assanasen,Zhao Lai,Yi Zou,Dias Kurmashev,Lin Xu,Yang Xie,Yidong Chen,Xiaojing Wang,Gail E. Tomlinson,Stephen X. Skapek,Peter J. Houghton,Raushan T. Kurmasheva,Siyuan Zheng
Nature Communicationsno. 1 (2023): 1-16
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作者统计
#Papers: 194
#Citation: 22075
H-Index: 39
G-Index: 148
Sociability: 7
Diversity: 0
Activity: 2
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