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职业迁徙
个人简介
Research interests
In the Molecular and Cellular Modeling group, our main focus is on proteins and finding out how they interact with their molecular binding partners and function. We develop and apply computational approaches to address questions such as: How do proteins recognize and distinguish their binding partners? How tightly and quickly do they bind? By what mechanisms do they bind? Can binding partners and binding modes be predicted? Our studies are mostly based on the three-dimensional structures of macromolecules. We aim to make concerted use of bioinformatics and physical simulation approaches in order to develop methods for understanding how biomolecules work and for aiding the rational design of therapeutic agents. Techniques cover a wide spectrum from interactive, web-based visualization tools to machine learning to molecular and Brownian dynamics simulations. Applications range from in-depth simulation studies of particular proteins to large-scale computational analysis of protein families.
研究兴趣
论文共 346 篇作者统计合作学者相似作者
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Proceedings of the 37th European Peptide Symposiumpp.1283-1283, (2024)
Philip Weidner,Daniel Saar,Michaela Soehn,Torsten Schroeder,Yanxiong Yu, Frank G. Zoellner,Norbert Ponelies, Xiaobo Zhou,Andre Zwicky,Florian N. Rohrbacher,Vijaya R. Pattabiraman,Matthias Tanriver, Alexander Bauer,Hazem Ahmed, Simon M. Ametamey,Philipp Riffel,Rony Seger,Jeffrey W. Bode,Rebecca C. Wade,Matthias P. A. Ebert,Birthe B. Kragelund,Elke Burgermeister
CANCER LETTERS (2024)
Matheus V. F. Ferraz, W. Camilla S. Adan, Tayná E. Lima, Adriele J. C. Santos,Sérgio O. de Paula, Rafael Dhalia, Gabriel L. Wallau,Rebecca C. Wade,Isabelle F. T. Viana,Roberto D. Lins
biorxiv(2024)
Despoina Charou,Thanasis Rogdakis,Alessia Latorrata,Maria Valcarcel,Vasileios Papadogiannis,Christina Athanasiou,Alexandros Tsengenes, Maria Anna Papadopoulou, Dimitrios Lypitkas,Matthieu D. Lavigne,Theodora Katsila,Rebecca C. Wade,M. Zameel Cader, Theodora Calogeropoulou,Achille Gravanis,Ioannis Charalampopoulos
STEM CELL RESEARCH & THERAPYno. 1 (2024)
Rommie Amaro,Johan Åqvist,Ivet Bahar,Federica Battistini, Adam Bellaiche,Daniel Beltran, Philip C. Biggin,Massimiliano Bonomi, Gregory R. Bowman, Richard Bryce,Giovanni Bussi,Paolo Carloni,David Case,Andrea Cavalli, Chie-En A. Chang, Thomas E. Cheatham III, Margaret S. Cheung, Cris Chipot,Lillian T. Chong, Preeti Choudhary,Gerardo Andres Cisneros,Cecilia Clementi,Rosana Collepardo-Guevara,Peter Coveney,Roberto Covino,T. Daniel Crawford,Matteo Dal Peraro,Bert de Groot,Lucie Delemotte,Marco De Vivo,Jonathan Essex,Franca Fraternali,Jiali Gao,Josep Lluís Gelpí,Francesco Luigi Gervasio,Fernando Danilo Gonzalez-Nilo, Helmut Grubmüller, Marina Guenza,Horacio V. Guzman,Sarah Harris,Teresa Head-Gordon,Rigoberto Hernandez,Adam Hospital,Niu Huang,Xuhui Huang,Gerhard Hummer,Javier Iglesias-Fernández, Jan H. Jensen,Shantenu Jha, Wanting Jiao, William L. Jorgensen,Shina Caroline Lynn Kamerlin, Syma Khalid,Charles Laughton,Michael Levitt, Vittorio Limongelli,Erik Lindahl,Kresten Lindorff-Larsen, Sharon Loverde,Magnus Lundborg, Yun Lyna Luo,Francisco Javier Luque, Charlotte I. Lynch,Alexander MacKerell, Alessandra Magistrato, Siewert J. Marrink, Hugh Martin, J. Andrew McCammon,Kenneth Merz, Vicent Moliner,Adrian Mulholland, Sohail Murad,Athi N. Naganathan, Shikha Nangia,Frank Noe,Agnes Noy,Julianna Oláh, Megan O'Mara,Mary Jo Ondrechen,José N. Onuchic,Alexey Onufriev, Silvia Osuna,Anna R. Panchenko, Sergio Pantano, Carol Parish,Michele Parrinello,Alberto Perez, Tomas Perez-Acle, Juan R. Perilla,B. Montgomery Pettitt, Adriana Pietropalo, Jean-Philip Piquemal, Adolfo Poma, Matej Praprotnik, Maria J. Ramos,Pengyu Ren,Nathalie Reuter,Adrian Roitberg, Edina Rosta, Carme Rovira,Benoit Roux,Ursula Röthlisberger,Karissa Y. Sanbonmatsu,Tamar Schlick,Alexey K. Shaytan,Carlos Simmerling, Jeremy C. Smith,Yuji Sugita,Katarzyna Świderek,Makoto Taiji, Peng Tao, Irina G. Tikhonova,Julian Tirado-Rives,Inaki Tunón, Marc W. Van Der Kamp,David Van der Spoel,Sameer Velankar,Gregory A. Voth,Rebecca Wade, Ariel Warshel,Valerie Vaissier Welborn, Stacey Wetmore, Chung F. Wong,Lee-Wei Yang,Martin Zacharias,Modesto Orozco
arxiv(2024)
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Computational and Structural Biotechnology Journal (2024): 1397-1407
biorxiv(2024)
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作者统计
#Papers: 345
#Citation: 13509
H-Index: 63
G-Index: 105
Sociability: 7
Diversity: 3
Activity: 74
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