Matthew Eaton - Massachusetts Institute of Technology

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Abstract 963: Comprehensive epigenomic profiling from plasma to inform therapy selection: A proof-of-concept study in cancer

Travis Clark,Ji-Heui Seo,Anthony D'Ippolito,Aparna Gorthi,Jonathan Beagan, Jamey Guess,Amy Donahue,Mandy Greene, Alyssa Lau, Fernando Ramirez, Kristian Cibulskis,Hyun-Hwan Jeong,Matthew Davidsohn, Gitanjali Lakshminarayanam,Michael Coyne, Baovy Tran,Tyrone Tamakloe,Hathairat Sawaengsri,Marc Eid,Karl Semaan,Brad Fortunato,Corrie A. Painter,Juliann Chmielecki,Toni K. Choueiri,J Carl Barrett,Geoff Otto,Matthew L. Freedman,Matthew L. Eaton,Sylvan C. Baca

Cancer Research（2024）

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Abstract 7558: Novel Liquid Biopsy Based Determination of Lung Cancer Histology Using a Comprehensive Epigenomic Platform Reveals Enhancer Activity As a Key Determinant for Accurate Classification

Jamey Guess,Aparna Gorthi, Anthony D'ippolity,Jonathan Beagan,Travis Clark,Michael Coyne,Tyrone Tamakloe, Baovy Tran,Hyun-Hwan Jeong, Kristian Cibulskis,Hathairat Sawaengsri,Juliann Chmielecki,Corrie A. Painter,J. Carl Barrett,Matthew Eaton

CANCER RESEARCHno. 6 (2024)

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Abstract PS06-07: Liquid biopsy determination of HER2 status in breast cancer: results from a novel epigenomic platform

Cancer Researchno. 9_Supplement (2024): PS06-07

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Novel Epigenomic Liquid Biopsy Assay to Predict Estrogen Receptor (ER) Status and to Infer ER Pathway Activation in Breast Cancer

Stefania Morganti,Jonathan Beagan,Anthony D'Ippolito,Kalie Smith,Melissa E. Hughes,Juliann Chmielecki,Aparna Gorthi,Corrie Painter,J. Carl Barrett,Matthew L. Eaton,Matthew Freedman,Sara M. Tolaney,Nancy U. Lin,Heather Anne Parsons

JOURNAL OF CLINICAL ONCOLOGYno. 16 (2024)

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Classification of HER2 Status Across Multiple Cancers Using Epigenomic Profiles from a Novel Liquid Biopsy Assay

Anthony D'Ippolito,Jonathan Beagan,Melissa E. Hughes,Matthew Strickland,Martin Samuel Taylor,Corrie Painter,Kalie Smith, Aditya Pandey, Ilexa A. Schechter, Mosammat F. Afreen,Jayne Stommel,Aparna Gorthi,Nancy U. Lin,Matthew Freedman,Heather Anne Parsons, Samuel J. Klempner,Gordon B. Mills,Sara M. Tolaney,Matthew Eaton,J. Carl Barrett

JOURNAL OF CLINICAL ONCOLOGYno. 16 (2024)

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Abstract 4643: A Novel Epigenomic Profiling Assay Reveals Disease Biology and Therapeutic Targets in Gastro-Esophageal Cancer from 1 Ml of Plasma

Jonathan Beagan,Aparna Gorthi,Anthony D'Ippolito,Travis Clark,Michael Coyne,Tyrone Tamakloe,Amy Donahue, Baovy Tran,Hyun-Hwan Jeong, Kristian Cibulskis,Hathairat Sawaengsri,Corrie A. Painter,Juliann Chmielecki,J Carl Barrett, Mosammat Faria Afreen, Aditya Pandey, Ilexa Ashley Schechter,Martin S. Taylor,Matthew R. Strickland,Matthew Eaton,Samuel J. Klempner

Cancer Researchno. 6_Supplement (2024): 4643-4643

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Supplementary Table S1: Sample mutations from Superenhancer Analysis Defines Novel Epigenomic Subtypes of Non-APL AML, Including an RARα Dependency Targetable by SY-1425, a Potent and Selective RARα Agonist

Michael R. McKeown,M. Ryan Corces,Matthew L. Eaton,Chris Fiore,Emily Lee,Jeremy T. Lopez,Mei Wei Chen,Darren Smith,Steven M. Chan,Julie L. Koenig,Kathryn Austgen,Matthew G. Guenther,David A. Orlando,Jakob Lovén,Christian C. Fritz,Ravindra Majeti

crossref（2023）

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Supplementary Table S7: GREAT Analysis from Superenhancer Analysis Defines Novel Epigenomic Subtypes of Non-APL AML, Including an RARα Dependency Targetable by SY-1425, a Potent and Selective RARα Agonist

crossref（2023）

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Supplementary Table S3: Median Survival by Cluster from Superenhancer Analysis Defines Novel Epigenomic Subtypes of Non-APL AML, Including an RARα Dependency Targetable by SY-1425, a Potent and Selective RARα Agonist

crossref（2023）

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Supplementary Methods and Figure Legends from Superenhancer Analysis Defines Novel Epigenomic Subtypes of Non-APL AML, Including an RARα Dependency Targetable by SY-1425, a Potent and Selective RARα Agonist

crossref（2023）

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