Gabernet Gisela - Quantitative Biology Center (QBiC), Eberhard Karls University of Tübingen

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论文共 52 篇作者统计合作学者相似作者

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How Tool Combinations in Different Pipeline Versions Affect the Outcome in RNA-seq Analysis

Louisa Wessels Perelo,Gisela Gabernet,Daniel Straub,Sven Nahnsen

NAR GENOMICS AND BIOINFORMATICSno. 1 (2024)

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Empowering bioinformatics communities with Nextflow and nf-core

Björn E. Langer,Andreia Amaral,Marie-Odile Baudement, Franziska Bonath,Mathieu Charles,Praveen Krishna Chitneedi,Emily L. Clark,Paolo Di Tommaso,Sarah Djebali,Philip A. Ewels,Sonia Eynard,James A. Fellows Yates, Daniel Fischer,Evan W. Floden,Sylvain Foissac,Gisela Gabernet,Maxime U. Garcia,Gareth Gillard,Manu Kumar Gundappa,Cervin Guyomar, Christopher Hakkaart,Friederike Hanssen,Peter W. Harrison, Matthias Hörtenhuber,Cyril Kurylo,Christa Kühn,Sandrine Lagarrigue,Delphine Lallias,Daniel J. Macqueen,Edmund Miller,Júlia Mir-Pedrol,Gabriel Costa Monteiro Moreira,Sven Nahnsen,Harshil Patel,Alexander Peltzer,Frederique Pitel,Yuliaxis Ramayo-Caldas, Marcel da Câmara Ribeiro-Dantas,Dominique Rocha,Mazdak Salavati,Alexey Sokolov,Jose Espinosa-Carrasco, Cedric Notredame, The Nf-core Community.

biorxiv（2024）

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PI3Kγ in B Cells Promotes Antibody Responses and Generation of Antibody-Secreting Cells

Stephen M. Lanahan, Lucas Yang,Kate M. Jones, Zhihong Qi,Emylette Cruz Cabrera,Lauren Y. Cominsky,Anjali Ramaswamy,Anis Barmada,Gisela Gabernet,Dinesh Babu Uthaya Kumar,Lan Xu,Peiying Shan,Matthias P. Wymann,Steven H. Kleinstein,V. Koneti Rao,Peter Mustillo,Neil Romberg,Roshini S. Abraham,Carrie L. Lucas

NATURE IMMUNOLOGYno. 8 (2024)

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Nf-Core/airrflow: an Adaptive Immune Receptor Repertoire Analysis Workflow Employing the Immcantation Framework

Gisela Gabernet,Susanna Marquez,Robert Bjornson,Alexander Peltzer,Hailong Meng,Edel Aron, Noah Y. Lee, Cole Jensen, David Ladd, Mark Polster,Friederike Hanssen,Simon Heumos,Gur Yaari,Markus C. Kowarik,Sven Nahnsen,Steven H. Kleinstein

PLOS COMPUTATIONAL BIOLOGYno. 7 (2024)

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NCBench: Providing an Open, Reproducible, Transparent, Adaptable, and Continuous Benchmark Approach for DNA-sequencing-based Variant Calling

Friederike Hanssen,Gisela Gabernet, Famke Bäuerle, Bianca Stöcker, Felix Wiegand,Nicholas H Smith,Christian Mertes, Avirup Guha Neogi, Leon Brandhoff, Anna Ossowski,Janine Altmueller,Kerstin Becker,Andreas Petzold,Marc Sturm,Tyll Stöcker,Sugirthan Sivalingam,Fabian Brand,Axel Schmidt,Andreas Buness,Alexander J Probst,Susanne Motameny,Johannes Köster

F1000Research（2024）

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Scalable and Efficient DNA Sequencing Analysis on Different Compute Infrastructures Aiding Variant Discovery

Friederike Hanssen,Maxime U. Garcia,Lasse Folkersen,AndersSune Pedersen,Francesco Lescai, Susanne Jodoin,Edmund Miller, Matthias Seybold, Oskar Wacker,Nicholas Smith,Gisela Gabernet,Sven Nahnsen

NAR GENOMICS AND BIOINFORMATICS（2024）

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Nf-Root: a Best-Practice Pipeline for Deep Learning-Based Analysis of Apoplastic Ph in Microscopy Images of Developmental Zones in Plant Root Tissue

Julian Wanner,Luis Kuhn Cuellar,Luiselotte Rausch,Kenneth W. Berendzen,Friederike Wanke,Gisela Gabernet,Klaus Harter,Sven Nahnsen

Quantitative Plant Biology (2024)

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Clinical Outcome of Biomarker-Guided Therapies in Adult Patients with Tumors of the Nervous System

NEURO-ONCOLOGY ADVANCESno. 1 (2023)

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P13.04.A REPRODUCIBLE CRISPR-SEQ PIPELINE FOR NGS FUNCTIONAL GENOMICS SCREENINGS FOR GLIOMA CELL LINES

L. Kuhlburger, J. Mir Pedrol,L. A. Haeusser, B. Walter,G. Gabernet,D. Merk,G. Tabatabai,S. Nahnsen

NEURO-ONCOLOGY (2023)

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Differential Effects of Ozanimod on B Cell Repertoires in Multiple Sclerosis Patients Compared to Other Oral Therapies

Nicole Vasilenko,Christoph Ruschil, Josua Stadelamaier, Annette Maier, Christian Arnold,Ulf Ziemann,Sven Nahnsen,Gisela Gabernet,Markus Kowarik

MULTIPLE SCLEROSIS JOURNAL (2023): 937-938

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