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个人简介
Chad Shaw is trained as a mathematical statistician, and he has worked in statistical genomics and bioinformatics for approximately 20 years. He is currently a Professor at BCM and Adjunct Professor of Statistics at Rice University. He is also the Senior Director of Innovation at Baylor Genetics Laboratory.
He has experience in next-generation sequencing, variant analysis, multi-omic data integration, gene expression profiling and variant functionalization. He also has expertise in copy-number analysis and has worked in the area of mechanistic studies of structural variation, with a focus on the role of repetitive elements in new mutations.
He led the development and analysis of an applied probabilistic model for the transmission of new mutations in the context of human genetic disease, which led to the elucidation of the dependency of recurrence risk on parent of origin, parental somatic mosaicism and paternal age. This fundamental contribution to human genetics was featured in many reviews and in the New York Times as a lay press article.
He has been an author on approximately 200 peer-reviewed publications, and his work has been cited approximately 17,000 times. He has trained 5 Ph.D. students in his own laboratory and over 10 students as a thesis committee member. He serves as chairman of the qualifying exam committee for the Quantitative and Computational Biosciences program. His students have performed methodologic research in high dimensional sparse regression, statistical methods for high throughput NGS screens approaches to modifiers of Mendelian disease, eQTL analyses and software tools for variant prioritization in rare disease diagnostics.
He has experience in next-generation sequencing, variant analysis, multi-omic data integration, gene expression profiling and variant functionalization. He also has expertise in copy-number analysis and has worked in the area of mechanistic studies of structural variation, with a focus on the role of repetitive elements in new mutations.
He led the development and analysis of an applied probabilistic model for the transmission of new mutations in the context of human genetic disease, which led to the elucidation of the dependency of recurrence risk on parent of origin, parental somatic mosaicism and paternal age. This fundamental contribution to human genetics was featured in many reviews and in the New York Times as a lay press article.
He has been an author on approximately 200 peer-reviewed publications, and his work has been cited approximately 17,000 times. He has trained 5 Ph.D. students in his own laboratory and over 10 students as a thesis committee member. He serves as chairman of the qualifying exam committee for the Quantitative and Computational Biosciences program. His students have performed methodologic research in high dimensional sparse regression, statistical methods for high throughput NGS screens approaches to modifiers of Mendelian disease, eQTL analyses and software tools for variant prioritization in rare disease diagnostics.
研究兴趣
论文共 334 篇作者统计合作学者相似作者
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Erin Thorpe, Taylor Williams,Chad Shaw, Evgenii Chekalin,Julia Ortega,Keisha Robinson, Jason Button,Marilyn C. Jones,Miguel del Campo,Donald Basel,Julie McCarrier, Laura Davis Keppen,Erin Royer, Romina Foster-Bonds,Milagros M. Duenas-Roque,Nora Urraca,Kerri Bosfield,Chester W. Brown, Holly Lydigsen,Henry J. Mroczkowski,Jewell Ward,Fabio Sirchia,Elisa Giorgio,Keith Vaux, Hildegard Pena Salguero,Aime Lumaka,Gerrye Mubungu,Prince Makay,Mamy Ngole,Prosper Tshilobo Lukusa,Adeline Vanderver,Kayla Muirhead,Omar Sherbini,Melissa D. Lah,Katelynn Anderson,Jeny Bazalar-Montoya,Richard S. Rodriguez,Mario Cornejo-Olivas,Karina Milla-Neyra,Marwan Shinawi,Pilar Magoulas,Duncan Henry, Kate Gibson,Samuel Wiafe,Parul Jayakar,Daria Salyakina,Diane Masser-Frye,Arturo Serize,Jorge E. Perez,Alan Taylor,Shruti Shenbagam,Ahmad Abou Tayoun,Alka Malhotra,Maren Bennett,Vani Rajan,James Avecilla, Andrew Warren, Max Arseneault,Tasha Kalista,Ali Crawford,Subramanian S. Ajay,Denise L. Perry,John Belmont,Ryan J. Taft
The American Journal of Human Geneticsno. 7 (2024): 1271-1281
biorxiv(2024)
JOURNAL OF PEDIATRIC GENETICSno. 01 (2024): 29-34
Investigative Ophthalmology & Visual Scienceno. 3 (2024): 25-25
Zeynep Coban‐Akdemir,Xiaofei Song,Francisco Ceballos,Davut Pehli̇van,Ender Karaca,Yavuz Bayram,Tadahiro Mitani, Tomasz Gambin, Tugce Bozkurt Yozgatli,Shalini N. Jhangiani,Donna M. Muzny,Richard A. Lewis, Pengfei Liu,Eric Boerwinkle,Ada Hamosh,Richard A. Gibbs, V. Reid Sutton,Nara Sobreira,Claudia M.B. Carvalho,Chad A. Shaw, Jennifer E. Posey,David Valle,James R. Lupski
Genetics in medicine openpp.101830-101830, (2024)
Experimental Hematology (2024): 104360
Runjun D. Kumar, Lisa F. Saba,Haley Streff,Chad A. Shaw,Elizabeth Mizerik, Matthew T. Snyder,Dolores Lopez-Terrada,Jennifer Scull
GENETICS IN MEDICINEno. 10 (2023)
Xiaomei Zhang,Sofie Claerhout, Aleix Prat,Lacey E. Dobrolecki, Ivana Petrovic,Qing Lai,Melissa D. Landis,Lisa Wiechmann,Rachel Schiff,Mario Giuliano,Helen Wong,Suzanne W. Fuqua,Alejandro Contreras,Carolina Gutierrez, Jian Huang,Sufeng Mao,Anne C. Pavlick,Amber M. Froehlich,Meng-Fen Wu,Anna Tsimelzon,Susan G. Hilsenbeck,Edward S. Chen,Pavel Zuloaga,Chad A. Shaw,Mothaffar F. Rimawi,Charles M. Perou,Gordon B. Mills, Jenny C. Chang,Michael T. Lewis
crossref(2023)
Bloodno. Supplement 1 (2023): 1296-1296
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作者统计
#Papers: 334
#Citation: 25648
H-Index: 83
G-Index: 156
Sociability: 8
Diversity: 0
Activity: 1
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