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Marinobacter Azerbaijanicus Sp. Nov., a Moderately Halophilic Bacterium from Urmia Lake, Iran.

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY(2024)

Univ Seville | Tabriz Univ Med Sci | Louisiana State Univ | Univ Tehran

Cited 0|Views16
Abstract
A novel moderately halophilic, Gram-stain-negative and facultatively anaerobic bacterium, designated as strain TBZ242T, was isolated from water of Urmia Lake in the Azerbaijan region of Iran. The cells were found to be rod-shaped and motile by a single polar flagellum, producing circular and yellowish colonies. The strain could grow in the presence of 0.5–10 % (w/v) NaCl (optimum, 2.5–5 %). The temperature and pH ranges for growth were 15–45 °C (optimum 30 °C) and pH 7.0–11.0 (optimum pH 8.0) on marine agar. The 16S rRNA gene sequence analysis revealed that strain TBZ242T belonged to the genus Marinobacter, showing the highest similarities to Marinobacter algicola DG893T (98.8 %), Marinobacter vulgaris F01T (98.8 %), Marinobacter salarius R9SW1T (98.5 %), Marinobacter panjinensis PJ-16T (98.4 %), Marinobacter orientalis W62T (98.0 %) and Marinobacter denitrificans JB2H27T (98.0 %). The 16S rRNA and core-genome phylogenetic trees showed that strain TBZ242T formed a distinct branch, closely related to a subclade accommodating M. vulgaris, M. orientalis, M. panjinensis, M. denitrificans, M. algicola, M. salarius and M. iranensis, within the genus Marinobacter. Average nucleotide identity and digital DNA–DNA hybridization values between strain TBZ242T and the type strains of the related species of Marinobacter were ≤85.0 and 28.6 %, respectively, confirming that strain TBZ242T represents a distinct species. The major cellular fatty acids of strain TBZ242T were C16 : 0 and C16 : 1 ω7c/C16 : 1 ω6c and the quinone was ubiquinone Q-9. The genomic DNA G+C content of strain TBZ242T is 57.2 mol%. Based on phenotypic, chemotaxonomic and genomic data, strain TBZ242T represents a novel species within the genus Marinobacter, for which the name Marinobacter azerbaijanicus sp. nov. is proposed. The type strain is TBZ242T (= CECT 30649T = IBRC-M 11466T). Genomic fragment recruitment analysis showed that this species prefers aquatic saline environments with intermediate salinities, being detected on metagenomic databases of Lake Meyghan (Iran) with 5 and 18 % salinity, respectively.
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Key words
comparative genomics,halophilic bacteria,Marinobacter,new taxa,taxonomy,Urmia Lake
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要点】:本研究发现了一种新的中度嗜盐细菌Marinobacter azerbaijanicus sp. nov.,来源于伊朗阿塞拜疆地区的乌尔米耶湖,具有独特的生理特性和基因序列,属于Marinobacter属。

方法】:通过形态学、生理生化特性分析、16S rRNA基因序列分析和基因组数据比较,确定该菌株的分类地位。

实验】:从乌尔米耶湖水样中分离得到菌株TBZ242T,并在0.5–10% NaCl浓度、15–45°C温度和pH 7.0–11.0条件下进行生长实验,使用Marine agar培养基。16S rRNA基因序列分析及核心基因组系统发育树表明该菌株形成独立分支,并与相关种进行比较,确认其为新种。实验结果还通过平均核苷酸同源性(ANI)和数字DNA-DNA杂交值进一步验证。主要细胞脂肪酸和醌类化合物也进行了分析。基因组DNA G+C含量为57.2 mol%。此外,通过基因组片段招募分析,确定该物种偏好中等盐度的水生环境。数据集名称未提及。