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Supplementary Figure S6 from in Vivo Screening Unveils Pervasive RNA-Binding Protein Dependencies in Leukemic Stem Cells and Identifies ELAVL1 As a Therapeutic Target

Ana Vujovic,Laura de Rooij Gene W. Yeo,Kristin J. Hope

openalex(2023)

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Abstract
Supplemental Figure S6 shows the GSEA of ELAVL1 depletion in mouse RN2c and human primary AML cells, ELAVL1 subcellular localization in mouse and human AML, the qRT-PCR of ELAVL1 targets in MS-444-treated RN2c cells, and the integrative analysis of the mouse RNA-seq and eCLIP-seq.
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Leukemia Stem Cells,Molecular Response
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要点】:本研究通过在体筛选发现白血病干细胞中普遍存在的RNA结合蛋白依赖性,并确定ELAVL1为治疗靶点。

方法】:使用基因集富集分析(GSEA)和定量RT-PCR等方法,结合RNA-seq和eCLIP-seq数据进行分析。

实验】:实验在mouse RN2c和人类原代AML细胞中进行,使用MS-444处理RN2c细胞,并进行小鼠的RNA-seq和eCLIP-seq综合分析。