SAR442257, a CD38/CD28/CD3 trispecific antibody, potentiates CAR T‐cell activity against large B‐cell lymphoma

M. R. Green,Patrick K. Reville, Erfu Dai, Irtiza Sheikh,Qing Deng,J. Henderson, Chap T. Le,Elizabeta A. Rojas, Chizitara Okwuchi,Ashley Wilson,S. B. Parsons,Shahin Lockman, Philip Kim, Kamlesh Bisht,Helgi van de Velde, Hongfei Wang,Sattva S. Neelapu,L. Wang

Hematological Oncology(2023)

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摘要
CART cell therapy has significantly improved outcomes of patients with relapsed/refractory large B cell lymphoma (rrLBCL), but many do not experience long term benefit. The mechanisms of failure are multifaceted including CAR T exhaustion. Understanding these mechanisms are likely to identify therapeutic avenues for improving outcomes. 13 rrLBCL tumors (7 CART naïve, 6 CART refractory), were subjected to scRNA-seq. Clustering was performed and frequency, clonal dominance, and expression of major cells and subclusters were compared. The effect of SAR442257, a CD38/CD28xCD3 trispecific antibody, was assessed in cytotoxicity assays and compared to control antibodies without CD38 or CD38/CD3/CD28 targeting regions. RL and HT cell lines were CRISPR modified to knock-out CD19 and isogenic WT used as target cells. CD19 CAR T were constructed from PBMCs of rrLBCL patients obtained at time of apheresis using a construct like axicabtagene ciloleucel. For cytotoxicity assays, cell lines were co-cultured at E:T ratios of 1:1 for 24 h or 48 h. scRNA-seq revealed that CART refractory rrLBCL tumors possessed higher fractions of terminally exhausted LAG3+TIM3+CD38+ CD8 T-cells (CD8TEX) with high expression of T-cell dysfunction and TEX signatures compared to CAR T naïve tumors. CD8TEX were most frequent in CART refractory tumors and enriched within CAR+CD8 T-cells detected. TCR clonotype analysis revealed highly expanded T-cell clones within the CD8TEX cluster, significantly increased clonal dominance, and reduced clonal diversity of CD8TEX cells in CAR T refractory compared to CART naïve tumors. Single cell differential gene expression revealed significantly increased expression of LAG3, TIM3, and CD38 in CD8 T-cells from CART refractory compared to CART naïve tumors. We hypothesized that SAR442257 could boost the activity of CD19 CART-cells from rrLBCL patients through dual antigen targeting of CD19 and CD38 on lymphoma cells and by fratricide of CD38-expressing CD8TEX cells. Cytotoxicity assays showed that SAR442257 significantly increased the killing of CAR T-cells against HT and RL WT (CD19+/CD38+) cells (24-h HT P-value = 3e-4, 24-h RL P-value = 1e-2) that persisted at 48 h. Addition of SAR442257 to CART-cells allowed killing of HT and RL CD19KO (CD19-/CD38+) (24-h HT P-value = 8e-7, 24-h RL P-value = 2e-8) at a level similar to the combination in WT. Addition of antibodies lacking CD38 or CD38/CD3/CD28-targeting regions did not boost cytotoxicity or rescue killing of CD19KO targets. We observed significant T-cell fratricide, which was beneficial or non-detrimental in light of increased lymphoma cell killing. The tumor microenvironment of CART refractory rrLBCL is enriched in clonally expanded and terminally exhausted CD8 T-cells expressing CD38. The CD38/CD28xCD3 trispecific antibody SAR442257 boosted CART-cell activity through recognition of CD38 on the tumor, costimulation of CART-cells, and induced fratricide of CD38+ T-cells. In addition, SAR442257 allowed CD19 CART-cells to kill CD19-/CD38+ LBCL cells. Encore Abstract - previously submitted to EHA 2023 The research was funded by: Sanofi Keywords: Aggressive B-cell non-Hodgkin lymphoma, Bioinformatics, Cellular therapies, Computational and Systems Biology Conflicts of interests pertinent to the abstract. P. Kim Employment or leadership position: Sanofi K. Bisht Employment or leadership position: Sanofi H. Van De Velde Employment or leadership position: Sanofi H. Wang Employment or leadership position: Sanofi
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