High-quality Full Genome Assembly of Historic Xylella Fastidiosa Strains from ICMP Collection Using a Hybrid Sequencing Approach

Pragya Kant, Natasha Brohier,Rachel Mann,Luciano Rigano,Robert Taylor,Johanna Wong-Bajracharya,Toni A. Chapman,Monica Kehoe,Rebecca Roach,Brendan Rodoni,Fiona Constable

Microbiology resource announcements（2023）

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摘要

High-quality complete genomes of five Xylella fastidiosa strains were assembled by combining Nanopore and Illumina sequencing data. Among these, International Collection of Micro-organisms from Plants (ICMP) 8731, ICMP 8742 and ICMP 8745 belong to subspecies fastidiosa while ICMP 8739 and ICMP 8740 were determined as subspecies multiplex. The strains were further classified into sequence types.

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关键词

bacteriology,Xylella fastidiosa subspecies fastidiosa,Xylella fastidiosa subspecies multiplex,long and short reads,MinION

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