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Cytosolic RGG RNA-binding Proteins Are Temperature Sensitive Flowering Time Regulators in Arabidopsis

Biological Chemistry(2023)SCI 3区SCI 4区

Univ Regensburg

Cited 1|Views18
Abstract
mRNA translation is tightly regulated by various classes of RNA-binding proteins (RBPs) during development and in response to changing environmental conditions. In this study, we characterize the arginine-glycine-glycine (RGG) motif containing RBP family of Arabidopsis thaliana representing homologues of the multifunctional translation regulators and ribosomal preservation factors Stm1 from yeast (ScStm1) and human SERBP1 (HsSERBP1). The Arabidopsis genome encodes three RGG proteins named AtRGGA, AtRGGB and AtRGGC. While AtRGGA is ubiquitously expressed, AtRGGB and AtRGGC are enriched in dividing cells. All AtRGGs localize almost exclusively to the cytoplasm and bind with high affinity to ssRNA, while being capable to interact with most nucleic acids, except dsRNA. A protein-interactome study shows that AtRGGs interact with ribosomal proteins and proteins involved in RNA processing and transport. In contrast to ScStm1, AtRGGs are enriched in ribosome-free fractions in polysome profiles, suggesting additional plant-specific functions. Mutant studies show that AtRGG proteins differentially regulate flowering time, with a distinct and complex temperature dependency for each AtRGG protein. In conclusion, we suggest that AtRGGs function in fine-tuning translation efficiency to control flowering time and potentially other developmental processes in response to environmental changes.
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mRNA binding,RBP,RGG motif,ribosome,SERBP1,Stm1
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要点】:研究揭示了在拟南芥中,细胞质内含RGG结构的RNA结合蛋白是温度敏感性的开花时间调节因子。

方法】:通过鉴定拟南芥中的RGG结构RNA结合蛋白家族,分析其表达模式、定位、RNA结合特性以及蛋白质相互作用网络。

实验】:通过构建拟南芥RGG蛋白突变体,研究其对开花时间的影响,并使用 polysome 分析技术来确定蛋白在无核糖体 fraction 中的富集情况,实验使用的数据集为拟南芥全基因组编码的RGG蛋白质序列及相互作用数据,结果表明RGG蛋白质在调节开花时间方面具有温度依赖性。