Detecting SARS-CoV-2 Omicron B.1.1.529 Variant in Wastewater Samples by Using Nanopore Sequencing.

Lasse D Rasmussen, Stine R Richter,Sofie E Midgley,Kristina T Franck

EMERGING INFECTIOUS DISEASES（2022）

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摘要

We report wastewater surveillance for SARS-CoV-2 variants of concern by using mutation-specific, real-time PCR and rapid nanopore sequencing. This surveillance might be useful for an early warning in a scenario in which a new variant is emerging, even in areas that have low virus incidences.

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B.1.1.529,COVID-19,Denmark. Omicron,SARS-CoV-2,coronaviruses,emerging variants,nanopore sequencing,respiratory infections,severe acute respiratory syndrome coronavirus 2,variants of concern,viruses,wastewater surveillance,zoonoses

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