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职业迁徙
个人简介
Dr. Bonneau focuses on two main categories of computational biology: learning networks from functional genomics data and predicting and designing protein and peptoid structure. In both areas he has played key roles in achieving critical field-wide milestones. In the area of structure prediction he was one of the early authors on the Rosetta code, which was one of the first codes to demonstrate accurate and comprehensive ability to predict protein structure in the absence of sequence homology. His lab has also made key contributions to the areas of genomics data analysis. They focus on two main areas: 1) methods for network inference that learn dynamics and topology from data (the Inferelator) , and 2) methods that learn condition dependent co-regulated groups from integrations of different genomics data-types (integrative biclustering). His lab strives to develop new methods that let systems-biologists derive functional forms from relevant biology and parameters from data automatically. Dr. Bonneau has also helped to start a new project with political scientists and experimental psychologists to apply methods for learning network structure from time series to social media time series data (using Twitter, online blogs about politics, and Facebook as our initial data sources
研究兴趣
论文共 282 篇作者统计合作学者相似作者
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Nathan C. Frey, Dan Berenberg,Karina Zadorozhny, Joseph Kleinhenz,Julien Lafrance-Vanasse,Isidro Hotzel, Yan Wu,Stephen Ra,Richard Bonneau,Kyunghyun Cho,Andreas Loukas,Vladimir Gligorijevic,Saeed Saremi
International Conference on Learning Representations (2024)
Dustin Britton, Luc F. Christians,Chengliang Liu,Jakub Legocki,Yingxin Xiao,Michael Meleties,Lin Yang,Michael Cammer,Sihan Jia, Zihan Zhang,Farbod Mahmoudinobar, Zuzanna Kowalski,P. Douglas Renfrew,Richard Bonneau,Darrin J. Pochan,Alexander J. Pak,Jin Kim Montclare
POLITICAL ANALYSIS (2024)
Jacob Kronenberg,Stanley Chu,Andrew Olsen,Dustin Britton, Leif Halvorsen,Shengbo Guo, Ashwitha Lakshmi, Jason Chen, Maria Jinu Kulapurathazhe,Cetara A. Baker, Benjamin C. Wadsworth, Cynthia J. Van Acker,John G. Lehman,Tamara C. Otto,P. Douglas Renfrew,Richard Bonneau,Jin Kim Montclare
CHEMISTRYOPENno. 7 (2024)
Gustaf Ahdritz,Nazim Bouatta,Christina Floristean,Sachin Kadyan, Qinghui Xia, William Gerecke,Timothy J. O'Donnell,Daniel Berenberg,Ian Fisk,Niccolo Zanichelli,Bo Zhang, Arkadiusz Nowaczynski,Bei Wang,Marta M. Stepniewska-Dziubinska,Shang Zhang,Adegoke Ojewole,Murat Efe Guney,Stella Biderman,Andrew M. Watkins,Stephen Ra,Pablo Ribalta Lorenzo,Lucas Nivon,Brian Weitzner, Yih-En Andrew Ban,Shiyang Chen,Minjia Zhang,Conglong Li,Shuaiwen Leon Song,Yuxiong He,Peter K. Sorger, Emad Mostaque,Zhao Zhang,Richard Bonneau,Mohammed AlQuraishi
NATURE METHODSno. 8 (2024)
Nathan C. Frey, Taylor Joren,Aya Abdelsalam Ismail, Allen Goodman,Richard Bonneau,Kyunghyun Cho,Vladimir Gligorijević
crossref(2024)
Jacob Kronenberg,Dustin Britton, Leif Halvorsen,Stanley Chu, Maria Jinu Kulapurathazhe, Jason Chen, Ashwitha Lakshmi,P. Douglas Renfrew,Richard Bonneau,Jin Kim Montclare
PROTEIN ENGINEERING DESIGN & SELECTION (2024)
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作者统计
#Papers: 284
#Citation: 20048
H-Index: 66
G-Index: 139
Sociability: 7
Diversity: 0
Activity: 3
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