Professor Vergote is currently Chairman of the Belgian & Luxemburg Gynaecological Oncology Group (BGOG), Chairman of the Protocol committee of the European Organization for Research, and Treatment of Cancer -Gynecologic Cancer Group (EORTC-GCG), and President of the Society of Robotic European Gynaecological Surgery (SERGS). Professor Vergote was the founder and first chairman of ENGOT from 2007 until 2012. In 2013 he was Chairman of the Board of Medical Chairmen of the University Hospital Leuven. Since 2014 he is a member of the Board of Directors of the University Hospital Leuven.
He has been Chairman of the EORTC-GCG from 1997 to 2003 and served as President of the European Society of Gynaecological Oncology (ESGO) for the period 2003-2005. For the period 2006-2008, he was the President of the International Gynecologic Cancer Society (IGCS). He has been Chairman of the Flemish Society of Obstetrics and Gynecology from 2008 to 2013. He was the founder and first chairman of the European Network of Gynaecological Oncological Trial Groups (ENGOT) from 2007 to 2012.