Fairlie Reese - Department of Developmental and Cell Biology, University of California

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论文共 23 篇作者统计合作学者相似作者

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Relapse to Cocaine Seeking is Regulated by Medial Habenula NR4A2/NURR1 in Mice

Jessica E. Childs,Samuel Morabito,Sudeshna Das, Caterina Santelli,Victoria Pham, Kelly Kusche,Vanessa Alizo Vera,Fairlie Reese,Rianne R. Campbell,Dina P. Matheos,Vivek Swarup,Marcelo A. Wood

CELL REPORTS（2024）

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Identification of robust cellular programs using reproducible LDA that impact sex-specific disease progression in different genotypes of a mouse model of AD

Narges Rezaie,Elisabeth Rebboah,Brian A. Williams, Heidi Yahan Liang,Fairlie Reese,Gabriela Balderrama-Gutierrez,Louise A. Dionne,Laura Reinholdt,Diane Trout,Barbara J. Wold,Ali Mortazavi

bioRxiv the preprint server for biology (2024)

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Long-read Sequencing Transcriptome Quantification with Lr-Kallisto

Rebekah K Loving,Delaney K Sullivan,Fairlie Reese,Elisabeth Rebboah,Jasmine Sakr,Narges Rezaie,Heidi Y Liang, Ghassan Filimban,Shimako Kawauchi, Conrad Oakes,Diane Trout,Brian A Williams,Grant MacGregor,Barbara J Wold,Ali Mortazavi,Lior Pachter

bioRxiv the preprint server for biology (2024)

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The ENCODE Mouse Postnatal Developmental Time Course Identifies Regulatory Programs of Cell Types and Cell States

Elisabeth Rebboah,Narges Rezaie,Brian A Williams,Annika K Weimer,Minyi Shi,Xinqiong Yang,Heidi Yahan Liang,Louise A Dionne,Fairlie Reese,Diane Trout,Jennifer Jou,Ingrid Youngworth,Laura Reinholdt,Samuel Morabito,Michael P Snyder,Barbara J Wold,Ali Mortazavi

bioRxiv the preprint server for biology (2024)

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Systematic Assessment of Long-Read RNA-seq Methods for Transcript Identification and Quantification

Francisco J. Pardo-Palacios,Dingjie Wang,Fairlie Reese,Mark Diekhans,Silvia Carbonell-Sala,Brian Williams,Jane E. Loveland,Maite De Maria,Matthew S. Adams,Gabriela Balderrama-Gutierrez,Amit K. Behera,Jose M. Gonzalez Martinez,Toby Hunt,Julien Lagarde, Cindy E. Liang, Haoran Li, Marcus Jerryd Meade,David A. Moraga Amador,Andrey D. Prjibelski,Inanc Birol,Hamed Bostan,Ashley M. Brooks,Muhammed Hasan Celik,Ying Chen,Mei R. M. Du,Colette Felton, Jonathan Goeke,Saber Hafezqorani,Ralf Herwig,Hideya Kawaji,Joseph Lee,Jian-Liang Li,Matthias Lienhard,Alla Mikheenko, Dennis Mulligan,Ka Ming Nip,Mihaela Pertea,Matthew E. Ritchie, Andre D. Sim,Alison D. Tang,Yuk Kei Wan, Changqing Wang,Brandon Y. Wong, Chen Yang,If Barnes,Andrew E. Berry,Salvador Capella-Gutierrez,Alyssa Cousineau,Namrita Dhillon, Jose M. Fernandez-Gonzalez, Luis Ferrandez-Peral, Natalia Garcia-Reyero, Stefan Goetz, Carles Hernandez-Ferrer, Liudmyla Kondratova,Tianyuan Liu, Alessandra Martinez-Martin, Carlos Menor,Jorge Mestre-Tomas,Jonathan M. Mudge, Nedka G. Panayotova, Alejandro Paniagua,Dmitry Repchevsky, Xingjie Ren,Eric Rouchka, Brandon Saint-John, Enrique Sapena, Leon Sheynkman,Melissa Laird Smith,Marie-Marthe Suner,Hazuki Takahashi,Ingrid A. Youngworth,Piero Carninci,Nancy D. Denslow,Roderic Guigo,Margaret E. Hunter, Rene Maehr,Yin Shen,Hagen U. Tilgner,Barbara J. Wold,Christopher Vollmers,Adam Frankish,Kin Fai Au,Gloria M. Sheynkman,Ali Mortazavi,Ana Conesa,Angela N. Brooks

NATURE METHODSno. 7 (2024)

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The ENCODE4 Long-Read RNA-seq Collection Reveals Distinct Classes of Transcript Structure Diversity

bioRxiv the preprint server for biology (2023)

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Long-read sequencing and profiling of RNA-binding proteins reveals the pathogenic mechanism of aberrant splicing of anSCN1Apoison exon in epilepsy

Hannah C Happ, P. J. Schneider,Jung Hwa Hong, Eleanor Goes, Masha Bandouil, Carina G. Biar,Aishwarya Ramamurthy,Fairlie Reese,Krysta Engel,Sarah Weckhuysen,Ingrid E. Scheffer,Heather C Mefford, Judith G. Calhoun,Gemma L. Carvill

bioRxiv (Cold Spring Harbor Laboratory) (2023)

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Spatial and Single-Nucleus Transcriptomic Analysis of Genetic and Sporadic Forms of Alzheimer's Disease

bioRxiv the preprint server for biology (2023)

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Long-read sequencing and profiling of RNA-binding proteins reveals the pathogenic mechanism of aberrant splicing of an SCN1A poison exon in epilepsy

Hannah C Happ,Patricia N Schneider,Jung Hwa Hong,Eleanor Goes, Masha Bandouil, Carina G Biar,Aishwarya Ramamurthy,Fairlie Reese,Krysta Engel,Sarah Weckhuysen,Ingrid E Scheffer,Heather C Mefford,Jeffrey D Calhoun,Gemma L Carvill

bioRxiv : the preprint server for biology (2023)

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L-GIREMI Uncovers RNA Editing Sites in Long-Read RNA-seq

Zhiheng Liu,Giovanni Quinones-Valdez,Ting Fu,Elaine Huang,Mudra Choudhury,Fairlie Reese,Ali Mortazavi,Xinshu Xiao

GENOME BIOLOGY（2023）

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