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个人简介
David Haussler’s research lies at the interface of mathematics, computer science, and molecular biology. He develops new statistical and algorithmic methods to explore the molecular function and evolution of the human genome, integrating cross-species comparative and high-throughput genomics data to study gene structure, function, and regulation. He is credited with pioneering the use of hidden Markov models (HMMs), stochastic context-free grammars, and the discriminative kernel method for analyzing DNA, RNA, and protein sequences. He was the first to apply the latter methods to the genome-wide search for gene expression biomarkers in cancer, now a major effort of his laboratory.
As a collaborator on the international Human Genome Project, his team posted the first publicly available computational assembly of the human genome sequence on the Internet on July 7, 2000. Following this, his team developed the UCSC Genome Browser, a web-based tool that is used extensively in biomedical research and serves as the platform for several large-scale genomics projects, including NHGRI’s ENCODE project to use omics methods to explore the function of every base in the human genome, NIH’s Mammalian Gene Collection, NHGRI’s 1000 genomes project to explore human genetic variation, and NCI’s Cancer Genome Atlas (TCGA) project to explore the genomic changes in cancer.
As a collaborator on the international Human Genome Project, his team posted the first publicly available computational assembly of the human genome sequence on the Internet on July 7, 2000. Following this, his team developed the UCSC Genome Browser, a web-based tool that is used extensively in biomedical research and serves as the platform for several large-scale genomics projects, including NHGRI’s ENCODE project to use omics methods to explore the function of every base in the human genome, NIH’s Mammalian Gene Collection, NHGRI’s 1000 genomes project to explore human genetic variation, and NCI’s Cancer Genome Atlas (TCGA) project to explore the genomic changes in cancer.
研究兴趣
论文共 590 篇作者统计合作学者相似作者
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David Shin,Chang N. Kim,Jayden Ross,Kelsey M. Hennick,Sih-Rong Wu,Neha Paranjape, Rachel Leonard, Jerrick C. Wang,Matthew G. Keefe,Bryan J. Pavlovic,Kevin C. Donohue,Clara Moreau,Emilie M. Wigdor, H. Hanh Larson,Denise E. Allen,Cathryn R. Cadwell,Aparna Bhaduri,Galina Popova,Carrie E. Bearden,Alex A. Pollen,Sebastien Jacquemont,Stephan J. Sanders,David Haussler,Arun P. Wiita,Nicholas A. Frost,Vikaas S. Sohal,Tomasz J. Nowakowski
biorxiv(2024)
Cancer Researchno. 6_Supplement (2024): 7406-7406
bioRxiv the preprint server for biology (2024)
bioRxiv : the preprint server for biology (2024)
SCIENTIFIC REPORTSno. 1 (2024)
Henry J. Martell,Avanthi T. Shah,Alex G. Lee,Stanley G. Leung,Soo-Jin Cho,María Pons Ventura, Ana Golla,Amanda E. Marinoff,Elizabeth P. Young,Bogdan Tanasa,Inge Behroozfard,Heng-Yi Liu,Aviv Spillinger,Michelle L. Turski, Nicole Elzie-Tuttle, Carlos Espinosa-Mendez,Arun Rangaswami,Tabitha M. Cooney,Cassie Kline,Anurag Agrawal, Jennifer Michlisch,Elliot Stieglitz,Mignon Loh,Amit J. Sabnis,Kieuhoa T. Vo,Sheri Spunt,Norman Lacayo, Holly C. Beal,Florette K. Hazard, Sophie Salama,David Haussler,Olena M. Vaske,Marcus R. Breese,E. Alejandro Sweet-Cordero
Cancer Researchno. 6_Supplement (2024): 1759-1759
Matthew A. T. Elliott, Hunter E. Schweiger,Ash Robbins,Samira Vera-Choqqueccota,Drew Ehrlich,Sebastian Hernandez,Kateryna Voitiuk,Jinghui Geng,Jess L. Sevetson, Cordero Core,Yohei M. Rosen,Mircea Teodorescu, Nico O. Wagner,David Haussler,Mohammed A. Mostajo-Radji
ENEUROno. 12 (2023)
Brian J. Raney,Galt P. Barber,Anna Benet-Pages,Jonathan Casper,Hiram Clawson,Melissa S. Cline,Mark Diekhans, Clayton Fischer,Jairo Navarro Gonzalez,Glenn Hickey,Angie S. Hinrichs,Robert M. Kuhn,Brian T. Lee,Christopher M. Lee, Phillipe Le Mercier, KarenH Miga,Luis R. Nassar,Parisa Nejad,Benedict Paten,Gerardo Perez,Daniel Schmelter,Matthew L. Speir,Brittney D. Wick,Ann S. Zweig,David Haussler,W. James Kent,Maximilian Haeussler
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作者统计
#Papers: 583
#Citation: 140832
H-Index: 155
G-Index: 374
Sociability: 9
Diversity: 1
Activity: 2
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