Adam M. Phillippy

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Bio

As a bioinformatician who bridges the fields of computer science and genomics, Dr. Phillippy has developed numerous widely-used tools for genome assembly, comparative genomics, microbial forensics, and metagenomics. Early in his career at The Institute for Genomic Research, he developed algorithms for whole-genome alignment that were used by the FBI to trace the origin of the 2001 anthrax attacks.

Research Interests

Papers共 185 篇Author StatisticsCo-AuthorSimilar Experts

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Integrated Analysis of the Complete Sequence of a Macaque Genome

Shilong Zhang, Ning Xu, Lianting Fu,Xiangyu Yang,Kaiyue Ma,Yamei Li,Zikun Yang, Zhengtong Li,Yu Feng, Xinrui Jiang, Junmin Han,Ruixing Hu, Lu Zhang, Da Lian,Luciana de Gennaro, Annalisa Paparella,Fedor Ryabov, Dan Meng,Yaoxi He,Dongya Wu,Chentao Yang, Yuxiang Mao,Xinyan Bian, Yong Lu,Francesca Antonacci,Mario Ventura,Valery A Shepelev,Karen H Miga,Ivan A Alexandrov,Glennis A Logsdon,Adam M Phillippy,Bing Su,Guojie Zhang,Evan E Eichler,Qing Lu,Yongyong Shi,Qiang Sun,Yafei Mao

Nature (2025)

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Chromosome-level Echidna Genome Illuminates Evolution of Multiple Sex Chromosome System in Monotremes

Yang Zhou, Jiazheng Jin, Xuemei Li,Gregory Gedman,Sarah Pelan,Arang Rhie, Chuan Jiang,Olivier Fedrigo,Kerstin Howe,Adam M. Phillippy,Erich D. Jarvis,Frank Grutzner,Qi Zhou,Guojie Zhang

GIGASCIENCE (2025)

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Comparative Genomics of Macaques and Integrated Insights into Genetic Variation and Population History

Shilong Zhang, Ning Xu, Lianting Fu,Xiangyu Yang,Yamei Li,Zikun Yang,Yu Feng,Kaiyue Ma, Xinrui Jiang, Junmin Han,Ruixing Hu,Lu Zhang,Luciana de Gennaro,Fedor Ryabov, Dan Meng,Yaoxi He,Dongya Wu,Chentao Yang, Annalisa Paparella, Yuxiang Mao,Xinyan Bian,Yong Lu,Francesca Antonacci,Mario Ventura,Valery A Shepelev,Karen H Miga,Ivan A Alexandrov,Glennis A Logsdon,Adam M Phillippy,Bing Su,Guojie Zhang,Evan E Eichler,Qing Lu,Yongyong Shi,Qiang Sun,Yafei Mao

bioRxiv the preprint server for biology (2024)

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Improved Sequence Mapping Using a Complete Reference Genome and Lift-over

Nae-Chyun Chen,Luis F. Paulin,Fritz J. Sedlazeck,Sergey Koren,Adam M. Phillippy,Ben Langmead

NATURE METHODSno. 1 (2024): 41-+

Cited4Views0WOSNATUREBibtex

Epigenetic Control and Inheritance of Rdna Arrays

Tamara Potapova, Paxton Kostos,Sean McKinney,Matthew Borchers,Jeff Haug,Andrea Guarracino, Steven Solar,Madelaine Gogol, Graciela Monfort Anez,Leonardo Gomes de Lima, Yan Wang,Kate Hall,Sophie Hoffman,Erik Garrison,Adam M Phillippy,Jennifer L Gerton

bioRxiv the preprint server for biology (2024)

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ModDotPlot-rapid and Interactive Visualization of Tandem Repeats

Alexander P. Sweeten,Michael C. Schatz,Adam M. Phillippy

Bioinformatics (Oxford, England)no. 8 (2024)

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The Formation and Propagation of Human Robertsonian Chromosomes

Leonardo Gomes de Lima,Andrea Guarracino,Sergey Koren,Tamara Potapova,Sean McKinney,Arang Rhie, Steven J Solar,Chris Seidel, Brandon Fagen,Brian P Walenz,Gerard G Bouffard,Shelise Y Brooks,Michael Peterson,Kate Hall, Juyun Crawford,Alice C Young,Brandon D Pickett,Erik Garrison,Adam M Phillippy,Jennifer L Gerton

bioRxiv the preprint server for biology (2024)

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Complete Sequencing of Ape Genomes

DongAhn Yoo,Arang Rhie, Prajna Hebbar,Francesca Antonacci,Glennis A Logsdon, Steven J Solar,Dmitry Antipov,Brandon D Pickett,Yana Safonova,Francesco Montinaro, Yanting Luo,Joanna Malukiewicz,Jessica M Storer,Jiadong Lin, Abigail N Sequeira,Riley J Mangan,Glenn Hickey, Graciela Monfort Anez,Parithi Balachandran,Anton Bankevich,Christine R Beck,Arjun Biddanda,Matthew Borchers,Gerard G Bouffard, Emry Brannan,Shelise Y Brooks,Lucia Carbone,Laura Carrel,Agnes P Chan, Juyun Crawford,Mark Diekhans,Eric Engelbrecht,Cedric Feschotte,Giulio Formenti,Gage H Garcia,Luciana de Gennaro,David Gilbert,Richard E Green,Andrea Guarracino, Ishaan Gupta,Diana Haddad, Junmin Han,Robert S Harris,Gabrielle A Hartley,William T Harvey,Michael Hiller,Kendra Hoekzema,Marlys L Houck,Hyeonsoo Jeong,Kaivan Kamali,Manolis Kellis,Bryce Kille,Chul Lee,Youngho Lee,William Lees,Alexandra P Lewis, Qiuhui Li,Mark Loftus, Yong Hwee Eddie Loh,Hailey Loucks,Jian Ma,Yafei Mao, Juan F I Martinez,Patrick Masterson,Rajiv C McCoy,Barbara McGrath,Sean McKinney,Britta S Meyer,Karen H Miga, Saswat K Mohanty,Katherine M Munson, Karol Pal,Matt Pennell,Pavel A Pevzner,David Porubsky,Tamara Potapova, Francisca R Ringeling, Joana L Roha,Oliver A Ryder,Samuel Sacco,Swati Saha,Takayo Sasaki,Michael C Schatz,Nicholas J Schork, Cole Shanks,Linnéa Smeds, Dongmin R Son,Cynthia Steiner, Alexander P Sweeten,Michael G Tassia,Françoise Thibaud-Nissen,Edmundo Torres-González,Mihir Trivedi, Wenjie Wei, Julie Wertz,Muyu Yang, Panpan Zhang,Shilong Zhang,Yang Zhang, Zhenmiao Zhang, Sarah A Zhao, Yixin Zhu,Erich D Jarvis,Jennifer L Gerton,Iker Rivas-González,Benedict Paten,Zachary A Szpiech,Christian D Huber,Tobias L Lenz,Miriam K Konkel,Soojin V Yi,Stefan Canzar,Corey T Watson,Peter H Sudmant,Erin Molloy,Erik Garrison,Craig B Lowe,Mario Ventura,Rachel J O'Neill,Sergey Koren,Kateryna D Makova,Adam M Phillippy,Evan E Eichler

bioRxiv the preprint server for biology (2024)

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Senior Investigator

Papers共 185 篇Author StatisticsCo-AuthorSimilar Experts