A Web-based Software Resource for Interactive Analysis of Multiplex Tissue Imaging Datasets
bioRxiv (Cold Spring Harbor Laboratory)(2022)
摘要
Abstract Highly multiplexed tissue imaging (MTI) are powerful spatial proteomics technologies that enable in situ single-cell characterization of tissues. However, analysis and visualization of MTI datasets remains challenging, and we developed the Galaxy-ME software hub to address this challenge.Galaxy-ME is a web-based, interactive software hub that enables end-to-end analysis and visualization of MTI datasets and is accessible to everyone. To demonstrate its utility, Galaxy-ME was used to analyze datasets obtained from multiple MTI assays and evaluate assay concordance in both normal and cancerous tissues. Galaxy-ME is a publicly available web resource.
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关键词
multiplex tissue imaging datasets,interactive analysis,software resource,web-based
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