ChiLin: ChIP-seq data analysis and quality control Pipeline

We present ChiLin (CHIp-seq pipeLINe), a software suite that automatically analyzes ChIP-seq data and reports on its data quality. The auto generated data quality report is clear and comprehensive. We have also compiled a quality score database to compare the data with historical data. ChiLin is an extensible software suite that is ideal for processing large batches of ChIP-seq and