Efficient Algorithms for Sequence Analysis with Entropic Profiles.
IEEE/ACM Transactions on Computational Biology and Bioinformatics(2018)
摘要
Entropy, being closely related to repetitiveness and compressibility, is a widely used information-related measure to assess the degree of predictability of a sequence. Entropic profiles are based on information theory principles, and can be used to study the under-/over-representation of subwords, by also providing information about the scale of conserved DNA regions. Here, we focus on the algori...
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关键词
Entropy,Arrays,Algorithm design and analysis,Sequences,Biological information theory,Standards
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