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I initially contributed as a software engineer, writing scalable data pipelines for processing Protein Data Bank entries. Later I become a "biology advisor" to the team, helping to assess the biological relevance of our predictions and handling collaboration requests from external scientists. I was particularly involved in the process of making AlphaFold publicly available. During this period I wrote a paper on the model's output applied to the whole human proteome, and worked with EMBL-EBI to produce a database of structure predictions covering human plus key model organisms.
My work now typically involves model evaluation - assembling appropriate test sets in order to judge whether a model is making progress on some biological problem. I still love discussing possible collaboration opportunities with the wider biology community!
My work now typically involves model evaluation - assembling appropriate test sets in order to judge whether a model is making progress on some biological problem. I still love discussing possible collaboration opportunities with the wider biology community!
研究兴趣
论文共 20 篇作者统计合作学者相似作者
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arxiv(2024)
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Josh Abramson,Jonas Adler, Jack Dunger,Richard Evans,Tim Green,Alexander Pritzel,Olaf Ronneberger, Lindsay Willmore,Andrew J Ballard, Joshua Bambrick, Sebastian W Bodenstein,David A Evans,
Naturepp.1-3, (2024)
Mihaly Varadi,Damian Bertoni, Paulyna Magana, Urmila Paramval, Ivanna Pidruchna, Malarvizhi Radhakrishnan, Maxim Tsenkov,Sreenath Nair,Milot Mirdita,Jingi Yeo, Oleg Kovalevskiy,Kathryn Tunyasuvunakool,
ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES (2022): A227-A227
Acta Crystallographica Section A Foundations and Advancesno. a1 (2022)
Mihaly Varadi,Stephen Anyango,Mandar Deshpande,Sreenath Nair, Cindy Natassia,Galabina Yordanova,David Yuan,Oana Stroe, Gemma Wood,Agata Laydon,Augustin Žídek,Tim Green,
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